EnhancerDB
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  3. rs139575875[chr12:46885123]
Enhancers that have rs139575875[chr12:46885123]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 46872285 46895935 enh14678
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Lung Stomach Placenta Colon (HCT116) Uterus Peripheral Blood (MM.1S) Lung (PC-9) Pancreas (Panc1) Neural Stem Cells (H9) Heart
Transcript factors that have rs139575875[chr12:46885123]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 46885115 46885124 SRY JASPAR yes 120628884
chr12 46885119 46885130 PHOX2A JASPAR yes 120628885
chr12 46885119 46885130 PROP1 JASPAR yes 120628886
chr12 46885120 46885124 YY1 TRANSFAC yes 120628887
chr12 46885122 46885132 ALX3 JASPAR yes 120628888
chr12 46885122 46885132 GSX1 JASPAR yes 120628889
chr12 46885122 46885132 GSX2 JASPAR yes 120628890
chr12 46885122 46885132 LHX6 JASPAR yes 120628891
chr12 46885122 46885132 MIXL1 JASPAR yes 120628892
chr12 46885122 46885132 MNX1 JASPAR yes 120628893
chr12 46885122 46885132 NOTO JASPAR yes 120628894
chr12 46885122 46885132 POU6F1 JASPAR yes 120628895
chr12 46885122 46885132 RAX JASPAR yes 120628896
chr12 46885122 46885137 HNF1A JASPAR yes 120628897
chr12 46885123 46885131 ISX JASPAR yes 120628898
chr12 46885123 46885131 LMX1A JASPAR yes 120628899
chr12 46885123 46885131 LMX1B JASPAR yes 120628900
chr12 46885123 46885131 NKX6-1 JASPAR yes 120628901
chr12 46885123 46885131 NKX6-2 JASPAR yes 120628902
chr12 46885123 46885131 PRRX1 JASPAR yes 120628903
chr12 46885123 46885131 RAX2 JASPAR yes 120628904
chr12 46885123 46885131 SHOX JASPAR yes 120628905
chr12 46885123 46885131 UNCX JASPAR yes 120628906
chr12 46885123 46885131 VAX1 JASPAR yes 120628907
chr12 46885123 46885134 PHOX2A JASPAR yes 120628908
chr12 46885123 46885134 PROP1 JASPAR yes 120628909
chr12 46885123 46885137 POU4F1 JASPAR yes 120628910
chr12 46885123 46885139 POU4F2 JASPAR yes 120628911
chr12 46885123 46885139 POU4F3 JASPAR yes 120628912
Genes associated with rs139575875[chr12:46885123], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More