EnhancerDB
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  3. rs139584634[chr1:181073545]
Enhancers that have rs139584634[chr1:181073545]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 181061310 181091955 enh12430
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs139584634[chr1:181073545]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 181073066 181073662 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21354425
chr1 181073111 181074411 ZNF274 GTRD no Bone Marrow (K562) 21354426
chr1 181073111 181074411 ZNF274 GTRD no Bone Marrow (K562) 107848365
chr1 181073126 181074349 ZBTB33 GTRD no Lung (A549) 107848366
chr1 181073251 181074386 ZBTB33 GTRD no Lung (A549) 107848367
chr1 181073294 181074337 ZBTB33 GTRD no Brain (SK-N-SH) 21354429
chr1 181073320 181074145 ZNF274 GTRD no Cervix (HeLa-S3) 21354430
chr1 181073324 181074348 ZBTB33 GTRD no Brain (SK-N-SH) 21354431
chr1 181073338 181074299 ZBTB33 GTRD no Brain (SK-N-SH) 21354432
chr1 181073340 181074117 ZNF274 GTRD no Cervix (HeLa-S3) 21354433
chr1 181073360 181074079 TCF7L2 GTRD no Colon (HCT116) 21354434
chr1 181073369 181074205 ZBTB33 GTRD no Brain (SK-N-SH) 21354435
chr1 181073390 181074210 ZBTB33 GTRD no Brain (SK-N-SH) 21354436
chr1 181073412 181074120 ZNF274 GTRD no Cervix (HeLa-S3) 21354437
chr1 181073417 181074157 ZBTB33 GTRD no Brain (SK-N-SH) 21354438
chr1 181073422 181074186 ZBTB33 GTRD no Brain (SK-N-SH) 21354439
chr1 181073425 181074255 ZBTB33 GTRD no Brain (SK-N-SH) 21354440
chr1 181073427 181074143 ZBTB33 GTRD no Brain (SK-N-SH) 21354441
chr1 181073436 181074164 ZNF143 GTRD no Epithelial (MCF-7) 21354442
chr1 181073438 181074129 ZNF274 GTRD no Cervix (HeLa-S3) 21354443
chr1 181073445 181074055 P63 GTRD no Skin (Keratinocyte) 21354444
chr1 181073446 181074216 ZBTB33 GTRD no Brain (SK-N-SH) 21354445
chr1 181073447 181074022 ZNF274 GTRD no Cervix (HeLa-S3) 21354446
chr1 181073452 181074326 ZBTB33 GTRD no Brain (SK-N-SH) 21354447
chr1 181073455 181074052 ZNF143 GTRD no Epithelial (MCF-7) 21354448
chr1 181073465 181074180 ZBTB33 GTRD no Brain (SK-N-SH) 21354449
chr1 181073465 181074255 ZBTB33 GTRD no Brain (SK-N-SH) 21354450
chr1 181073467 181074137 ZBTB33 GTRD no Brain (SK-N-SH) 21354451
chr1 181073470 181074094 ZNF274 GTRD no Cervix (HeLa-S3) 21354452
chr1 181073470 181074179 ZNF274 GTRD no Cervix (HeLa-S3) 21354453
chr1 181073480 181073971 ZNF274 GTRD no Bone Marrow (K562) 21354454
chr1 181073481 181074037 ZNF274 GTRD no Bone Marrow (K562) 21354455
chr1 181073482 181074144 ZBTB33 GTRD no Brain (SK-N-SH) 21354456
chr1 181073482 181074254 ZBTB33 GTRD no Brain (SK-N-SH) 21354457
chr1 181073486 181074168 ZBTB33 GTRD no Brain (SK-N-SH) 21354458
chr1 181073492 181074134 ZNF274 GTRD no Cervix (HeLa-S3) 21354459
chr1 181073495 181074055 ZBTB33 GTRD no Brain (SK-N-SH) 21354460
chr1 181073506 181074194 ZBTB33 GTRD no Brain (SK-N-SH) 21354461
chr1 181073526 181074090 ZBTB33 GTRD no Brain (SK-N-SH) 21354462
chr1 181073540 181074125 ZBTB33 GTRD no Brain (SK-N-SH) 21354463
chr1 181073545 181073549 LFA1 TRANSFAC yes 33553131
Genes associated with rs139584634[chr1:181073545], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More