EnhancerDB
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  3. rs139602094[chr17:872409]
Enhancers that have rs139602094[chr17:872409]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 845785 881195 enh32038
Astrocyte Colon (HCT116) Pancreas Uterus Stomach Epithelial (MCF-7) Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Thyroid Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673)
chr17 872261 872610 vista23629
VISTA
Transcript factors that have rs139602094[chr17:872409]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 872020 872453 TCF7L2 GTRD no Colon (HCT116) 21739051
chr17 872020 872453 TCF7L2 GTRD no Colon (HCT116) 108227849
chr17 872080 872543 TCF7L2 GTRD no Colon (HCT116) 21739052
chr17 872080 872543 TCF7L2 GTRD no Colon (HCT116) 108227850
chr17 872400 872412 HES5 JASPAR yes 21179796
chr17 872400 872412 HES7 JASPAR yes 21179797
chr17 872400 872412 HES5 JASPAR yes 52647132
chr17 872400 872412 HES7 JASPAR yes 52647133
chr17 872401 872411 BHLHE40 JASPAR yes 21179798
chr17 872401 872411 BHLHE41 JASPAR yes 21179799
chr17 872401 872411 CLOCK JASPAR yes 21179800
chr17 872401 872411 HEY1 JASPAR yes 21179801
chr17 872401 872411 HEY2 JASPAR yes 21179802
chr17 872401 872411 MAX JASPAR yes 21179803
chr17 872401 872411 MLXIPL JASPAR yes 21179804
chr17 872401 872411 MLX JASPAR yes 21179805
chr17 872401 872411 MNT JASPAR yes 21179806
chr17 872401 872411 TFE3 JASPAR yes 21179807
chr17 872401 872411 TFEB JASPAR yes 21179808
chr17 872401 872411 TFEC JASPAR yes 21179809
chr17 872401 872411 BHLHE40 JASPAR yes 52647134
chr17 872401 872411 BHLHE41 JASPAR yes 52647135
chr17 872401 872411 CLOCK JASPAR yes 52647136
chr17 872401 872411 HEY1 JASPAR yes 52647137
chr17 872401 872411 HEY2 JASPAR yes 52647138
chr17 872401 872411 MAX JASPAR yes 52647139
chr17 872401 872411 MLXIPL JASPAR yes 52647140
chr17 872401 872411 MLX JASPAR yes 52647141
chr17 872401 872411 MNT JASPAR yes 52647142
chr17 872401 872411 TFE3 JASPAR yes 52647143
chr17 872401 872411 TFEB JASPAR yes 52647144
chr17 872401 872411 TFEC JASPAR yes 52647145
Genes associated with rs139602094[chr17:872409], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More