EnhancerDB
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  3. rs139606885[chr1:41860149]
Enhancers that have rs139606885[chr1:41860149]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 41849805 41888800 enh11788
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs139606885[chr1:41860149]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 41860137 41860151 PLAG1 JASPAR yes 28384593
chr1 41860147 41860155 SP1 TRANSFAC yes 28384594
chr1 41860147 41860157 SP1 JASPAR yes 28384595
Genes associated with rs139606885[chr1:41860149], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More