EnhancerDB
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  3. rs139623728[chr1:168439506]
Enhancers that have rs139623728[chr1:168439506]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 168433465 168471139 enh12354
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Lung (A549) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs139623728[chr1:168439506]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 168438482 168440518 ZNF274 GTRD no Bone Marrow (K562) 21348094
chr1 168438482 168440518 ZNF274 GTRD no Bone Marrow (K562) 107844722
chr1 168439134 168440311 AR GTRD no Prostate (PC-3) 21348153
chr1 168439146 168440696 ZBTB33 GTRD no Lung (A549) 21348154
chr1 168439146 168440696 ZBTB33 GTRD no Lung (A549) 107844723
chr1 168439216 168440540 ZBTB33 GTRD no Lung (A549) 21348155
chr1 168439216 168440540 ZBTB33 GTRD no Lung (A549) 107844724
chr1 168439249 168440658 ZNF274 GTRD no Bone Marrow (K562) 21348156
chr1 168439249 168440658 ZNF274 GTRD no Bone Marrow (K562) 107844725
chr1 168439286 168440437 ZNF274 GTRD no Cervix (HeLa-S3) 107844726
chr1 168439366 168440445 ZNF143 GTRD no Epithelial (MCF-7) 21348157
chr1 168439366 168440445 ZNF143 GTRD no Epithelial (MCF-7) 107844727
chr1 168439379 168440480 ZNF143 GTRD no Epithelial (MCF-7) 21348158
chr1 168439379 168440480 ZNF143 GTRD no Epithelial (MCF-7) 107844728
chr1 168439402 168440410 ZNF274 GTRD no Bone Marrow (K562) 21348159
chr1 168439403 168440383 ZNF274 GTRD no Blood (GM12878) 21348160
chr1 168439407 168440167 ZNF274 GTRD no Bone Marrow (K562) 21348161
chr1 168439416 168440405 ZNF274 GTRD no Blood (GM12878) 21348162
chr1 168439418 168440272 ZNF143 GTRD no Epithelial (MCF-7) 21348163
chr1 168439437 168440341 ZNF143 GTRD no Epithelial (MCF-7) 21348164
chr1 168439445 168440364 ZNF274 GTRD no Blood (GM12878) 21348165
chr1 168439445 168440434 ZNF274 GTRD no Bone Marrow (K562) 21348166
chr1 168439445 168440434 ZNF274 GTRD no Bone Marrow (K562) 107844729
chr1 168439454 168440409 ZBTB33 GTRD no Lung (A549) 21348167
chr1 168439459 168440358 ZBTB33 GTRD no Lung (A549) 21348168
chr1 168439459 168440363 ZBTB33 GTRD no Lung (A549) 21348169
chr1 168439459 168440382 ZNF274 GTRD no Bone Marrow (K562) 21348170
chr1 168439461 168440309 ZNF274 GTRD no Liver (HepG2) 21348171
chr1 168439472 168439895 ZNF274 GTRD no Bone Marrow (K562) 21348172
chr1 168439476 168440236 ZNF274 GTRD no Blood (GM12878) 21348173
chr1 168439483 168440565 ZNF143 GTRD no Epithelial (MCF-7) 21348174
chr1 168439483 168440565 ZNF143 GTRD no Epithelial (MCF-7) 107844730
chr1 168439488 168440339 ZNF274 GTRD no Bone Marrow (K562) 21348175
chr1 168439490 168440488 ZBTB33 GTRD no Lung (A549) 21348176
chr1 168439490 168440488 ZBTB33 GTRD no Lung (A549) 107844731
chr1 168439491 168439506 FOXP1 JASPAR yes 32928218
chr1 168439498 168440337 ZNF274 GTRD no Blood (GM12878) 21348177
chr1 168439504 168439509 GATA2 JASPAR yes 32928220
Genes associated with rs139623728[chr1:168439506], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More