EnhancerDB
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  3. rs139624040[chr17:48956751]
Enhancers that have rs139624040[chr17:48956751]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 48954425 48973436 enh32228
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1)
Transcript factors that have rs139624040[chr17:48956751]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 48956586 48956816 ZNF274 GTRD no Liver (HepG2) 21770122
chr17 48956736 48956751 FOXP1 JASPAR yes 54727847
chr17 48956736 48956757 IRF1 JASPAR yes 54727848
chr17 48956740 48956755 STAT2 JASPAR yes 54727849
chr17 48956741 48956756 FOXP1 JASPAR yes 54727850
chr17 48956744 48956755 FOXP2 JASPAR yes 54727851
chr17 48956748 48956754 HiNF-A TRANSFAC yes 54727852
Genes associated with rs139624040[chr17:48956751], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More