EnhancerDB
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  3. rs139629541[chr3:12689178]
Enhancers that have rs139629541[chr3:12689178]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 12682305 12692249 enh35195
Liver (HepG2) Lung (PC-9) Astrocyte Blood (GM12878) Stomach Peripheral Blood (MM.1S) Uterus Muscle (Myoblast) Breast Neural Stem Cells (H9) Heart
chr3 12688995 12689498 vista39994
VISTA
Transcript factors that have rs139629541[chr3:12689178]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 12689103 12689451 FOXA1 UCSC Txn Factor no Conserved 108528251
chr3 12689105 12689430 CEBPB UCSC Txn Factor no Conserved 108528252
chr3 12689109 12689499 EP300 UCSC Txn Factor no Conserved 108528253
chr3 12689110 12689440 FOXA2 UCSC Txn Factor no Conserved 108528254
chr3 12689150 12689458 RUNX3 UCSC Txn Factor no Conserved 108528255
chr3 12689176 12689194 MAFF JASPAR yes 492659
chr3 12689176 12689194 MAFF JASPAR yes 70938906
chr3 12689178 12689189 NRL JASPAR yes 492660
chr3 12689178 12689189 NRL JASPAR yes 70938907
chr3 12689178 12689193 MAFK JASPAR yes 492661
chr3 12689178 12689193 MAFK JASPAR yes 70938908
Genes associated with rs139629541[chr3:12689178], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More