EnhancerDB
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  3. rs139657064[chr12:53953004]
Enhancers that have rs139657064[chr12:53953004]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 53952154 53966435 enh2368
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Stomach Muscle (A673) Colon (HCT116) Uterus Blood (Karpas-422) Lung (PC-9) Muscle (Myoblast) Pancreas (Panc1) Muscle (Myotube) Neural Stem Cells (H9) Heart
Transcript factors that have rs139657064[chr12:53953004]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 53952989 53953010 IRF1 JASPAR yes 120990597
chr12 53952991 53953006 FOXP1 JASPAR yes 120990598
chr12 53952996 53953017 IRF1 JASPAR yes 120990599
chr12 53952998 53953019 IRF1 JASPAR yes 120990600
chr12 53953002 53953016 IRF7 JASPAR yes 120990601
chr12 53953002 53953023 IRF1 JASPAR yes 120990602
chr12 53953003 53953018 FOXP1 JASPAR yes 120990603
chr12 53953003 53953024 IRF1 JASPAR yes 120990604
chr12 53953003 53953024 ZNF263 JASPAR yes 120990605
chr12 53953004 53953019 PRDM1 JASPAR yes 120990606
chr12 53953004 53953025 IRF1 JASPAR yes 120990607
Genes associated with rs139657064[chr12:53953004], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More