EnhancerDB
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  3. rs139690443[chr16:4351879]
Enhancers that have rs139690443[chr16:4351879]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 4330820 4352135 enh16514
Astrocyte Colon (HCT116) Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs139690443[chr16:4351879]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 4350404 4352339 ZNF274 GTRD no Liver (HepG2) 21686597
chr16 4350439 4351921 TCF7L2 GTRD no Colon (HCT116) 21686604
chr16 4350451 4351986 ZNF274 GTRD no Liver (HepG2) 21686606
chr16 4350465 4351990 ZNF274 GTRD no Liver (HepG2) 21686607
chr16 4350502 4352318 ZNF143 GTRD no Epithelial (MCF-7) 21686612
chr16 4350536 4352320 ZNF274 GTRD no Cervix (HeLa-S3) 21686617
chr16 4350588 4352275 ZBTB33 GTRD no Brain (SK-N-SH) 21686629
chr16 4350664 4352313 ZBTB33 GTRD no Brain (SK-N-SH) 21686638
chr16 4351060 4351899 ZNF274 GTRD no Liver (HepG2) 21686670
chr16 4351100 4351955 ZNF274 GTRD no Liver (HepG2) 21686675
chr16 4351138 4352000 ZNF274 GTRD no Liver (HepG2) 21686678
chr16 4351531 4351971 ZNF143 GTRD no Epithelial (MCF-7) 21686689
chr16 4351669 4352324 ZBTB33 GTRD no Brain (SK-N-SH) 21686690
chr16 4351873 4351893 TP53 JASPAR yes 9268843
chr16 4351875 4351887 HES5 JASPAR yes 9268844
chr16 4351875 4351887 HES7 JASPAR yes 9268845
chr16 4351875 4351887 PKNOX2 JASPAR yes 9268846
chr16 4351875 4351895 TP63 JASPAR yes 9268847
chr16 4351876 4351894 TP53 JASPAR yes 9268848
chr16 4351876 4351894 TP63 JASPAR yes 9268849
chr16 4351876 4351894 TP73 JASPAR yes 9268850
chr16 4351877 4351892 TP53 JASPAR yes 9268851
chr16 4351877 4351897 TP53 JASPAR yes 9268852
chr16 4351878 4351893 TP53 JASPAR yes 9268853
chr16 4351879 4351890 FOXA1 JASPAR yes 9268854
chr16 4351879 4351894 FOXA1 JASPAR yes 9268855
Genes associated with rs139690443[chr16:4351879], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More