EnhancerDB
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  3. rs139698228[chr14:55572163]
Enhancers that have rs139698228[chr14:55572163]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr14 55550545 55578795 enh15631
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs139698228[chr14:55572163]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr14 55572154 55572164 ERF JASPAR yes 115530340
chr14 55572156 55572166 RUNX3 JASPAR yes 115530341
chr14 55572157 55572166 RUNX2 JASPAR yes 115530342
chr14 55572159 55572177 RARA JASPAR yes 115530343
chr14 55572161 55572165 ESR1 TRANSFAC yes 115530344
Genes associated with rs139698228[chr14:55572163], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More