EnhancerDB
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  3. rs139702190[chr2:102342549]
Enhancers that have rs139702190[chr2:102342549]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 102318065 102395755 enh5746
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Spleen Muscle (Myotube) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs139702190[chr2:102342549]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 102342546 102342561 HNF4A JASPAR yes 75831449
chr2 102342547 102342561 NR2F1 JASPAR yes 75831450
chr2 102342547 102342562 HNF4G JASPAR yes 75831451
Genes associated with rs139702190[chr2:102342549], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More