EnhancerDB
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  3. rs139711460[chr1:226851477]
Enhancers that have rs139711460[chr1:226851477]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 226838901 226907579 enh973
Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs139711460[chr1:226851477]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 226851473 226851479 ZNF354C JASPAR yes 35829570
chr1 226851475 226851491 GLIS1 JASPAR yes 35829571
chr1 226851476 226851486 ZNF740 JASPAR yes 35829572
chr1 226851476 226851490 GLIS2 JASPAR yes 35829573
chr1 226851476 226851490 GLIS3 JASPAR yes 35829574
chr1 226851476 226851490 ZIC1 JASPAR yes 35829575
chr1 226851476 226851491 ZIC3 JASPAR yes 35829576
chr1 226851476 226851491 ZIC4 JASPAR yes 35829577
Genes associated with rs139711460[chr1:226851477], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More