EnhancerDB
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  3. rs139725297[chr13:113360333]
Enhancers that have rs139725297[chr13:113360333]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr13 113356925 113401095 enh15512
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs139725297[chr13:113360333]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr13 113360317 113360338 IRF1 JASPAR yes 60427613
chr13 113360319 113360334 IRF9 JASPAR yes 60427614
chr13 113360320 113360334 IRF7 JASPAR yes 60427615
chr13 113360320 113360334 IRF8 JASPAR yes 60427616
chr13 113360321 113360335 STAT1 JASPAR yes 60427617
chr13 113360321 113360336 STAT2 JASPAR yes 60427618
chr13 113360321 113360339 IRF2 JASPAR yes 60427619
chr13 113360322 113360334 IRF1 JASPAR yes 60427620
chr13 113360329 113360339 PAX3 JASPAR yes 60427621
chr13 113360331 113360340 VENTX JASPAR yes 60427622
chr13 113360333 113360337 YY1 TRANSFAC yes 60427623
chr13 113360333 113360351 E2F3 JASPAR yes 60427624
Genes associated with rs139725297[chr13:113360333], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More