EnhancerDB
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  3. rs139729329[chr1:230282306]
Enhancers that have rs139729329[chr1:230282306]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 230237385 230313644 enh12770
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr1 230280348 230284066 vista144
VISTA
Transcript factors that have rs139729329[chr1:230282306]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 230282039 230282550 ZNF274 GTRD no Bone Marrow (K562) 21391554
chr1 230282039 230282550 ZNF274 GTRD no Bone Marrow (K562) 107878785
chr1 230282061 230282568 ZBTB33 GTRD no Brain (SK-N-SH) 21391555
chr1 230282061 230282568 ZBTB33 GTRD no Brain (SK-N-SH) 107878786
chr1 230282172 230282527 ZNF274 GTRD no Blood (GM12878) 21391556
chr1 230282172 230282527 ZNF274 GTRD no Blood (GM12878) 107878787
chr1 230282183 230282612 ZNF143 GTRD no Epithelial (MCF-7) 21391557
chr1 230282183 230282612 ZNF143 GTRD no Epithelial (MCF-7) 107878788
Genes associated with rs139729329[chr1:230282306], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More