EnhancerDB
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  3. rs139745406[chr2:240201856]
Enhancers that have rs139745406[chr2:240201856]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 240159334 240219661 enh6224
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr2 240201720 240202445 vista35502
VISTA
Transcript factors that have rs139745406[chr2:240201856]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 240201793 240202338 STAT1 UCSC Txn Factor no Conserved 108436021
chr2 240201851 240201866 SCRT1 JASPAR yes 22245887
chr2 240201851 240201866 SCRT1 JASPAR yes 82225321
Genes associated with rs139745406[chr2:240201856], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More