EnhancerDB
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  3. rs139779337[chr17:57828964]
Enhancers that have rs139779337[chr17:57828964]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 57820705 57849586 enh4505
Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs139779337[chr17:57828964]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 57828954 57828974 RREB1 JASPAR yes 55076994
chr17 57828958 57828968 SP1 JASPAR yes 55076995
chr17 57828962 57828976 GLIS2 JASPAR yes 55076996
chr17 57828962 57828976 GLIS3 JASPAR yes 55076997
Genes associated with rs139779337[chr17:57828964], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More