EnhancerDB
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  3. rs139782448[chr1:225789480]
Enhancers that have rs139782448[chr1:225789480]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 225783583 225807972 enh43160
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Esophagus Bone (Osteoblast) Lung Stomach Muscle (A673) Colon (HCT116) Uterus Lung (PC-9) Pancreas (Panc1) Muscle (Myotube) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs139782448[chr1:225789480]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 225789469 225789490 IRF1 JASPAR yes 35753749
chr1 225789472 225789486 IRF7 JASPAR yes 35753750
chr1 225789479 225789485 TBP TRANSFAC yes 35753751
chr1 225789480 225789491 FOXC1 JASPAR yes 35753752
Genes associated with rs139782448[chr1:225789480], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More