EnhancerDB
  1. Home
  2. SNP
  3. rs139789601[chr12:94169770]
Enhancers that have rs139789601[chr12:94169770]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 94163885 94183295 enh14903
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs139789601[chr12:94169770]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 94169318 94170994 ZNF274 GTRD no Bone Marrow (K562) 21565825
chr12 94169318 94170994 ZNF274 GTRD no Bone Marrow (K562) 108051422
chr12 94169353 94170567 GATA3 GTRD no Thymus 21565826
chr12 94169353 94170567 GATA3 GTRD no Thymus 108051423
chr12 94169367 94170732 ZNF274 GTRD no Blood (GM12878) 108051424
chr12 94169483 94171132 ZNF143 GTRD no Epithelial (MCF-7) 21565827
chr12 94169483 94171132 ZNF143 GTRD no Epithelial (MCF-7) 108051425
chr12 94169614 94171137 ZNF143 GTRD no Epithelial (MCF-7) 21565828
chr12 94169614 94171137 ZNF143 GTRD no Epithelial (MCF-7) 108051426
chr12 94169647 94170665 ZNF274 GTRD no Bone Marrow (K562) 21565829
chr12 94169647 94170665 ZNF274 GTRD no Bone Marrow (K562) 108051427
chr12 94169647 94171605 ZNF274 GTRD no Liver (HepG2) 21565830
chr12 94169647 94171605 ZNF274 GTRD no Liver (HepG2) 108051428
chr12 94169649 94171381 ZNF143 GTRD no Epithelial (MCF-7) 21565831
chr12 94169649 94171381 ZNF143 GTRD no Epithelial (MCF-7) 108051429
chr12 94169680 94170597 ZNF274 GTRD no Bone Marrow (K562) 21565832
chr12 94169680 94170597 ZNF274 GTRD no Bone Marrow (K562) 108051430
chr12 94169751 94169772 IRF1 JASPAR yes 122881128
chr12 94169755 94169770 IRF9 JASPAR yes 122881134
Genes associated with rs139789601[chr12:94169770], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More