EnhancerDB
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  3. rs139792012[chr3:58060353]
Enhancers that have rs139792012[chr3:58060353]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 58016005 58062055 enh20647
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs139792012[chr3:58060353]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 58060345 58060360 STAT2 JASPAR yes 2673287
chr3 58060347 58060361 IRF8 JASPAR yes 2673288
chr3 58060347 58060362 IRF9 JASPAR yes 2673289
chr3 58060348 58060353 GATA1 TRANSFAC yes 2673290
Genes associated with rs139792012[chr3:58060353], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More