EnhancerDB
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  3. rs139810010[chr1:234657887]
Enhancers that have rs139810010[chr1:234657887]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 234649189 234693444 enh991
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs139810010[chr1:234657887]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 234654963 234658926 ZNF274 GTRD no Cervix (HeLa-S3) 21393770
chr1 234654963 234658926 ZNF274 GTRD no Cervix (HeLa-S3) 107880090
chr1 234656231 234660423 ZNF274 GTRD no Cervix (HeLa-S3) 21393809
chr1 234656231 234660423 ZNF274 GTRD no Cervix (HeLa-S3) 107880091
chr1 234656231 234660423 ZNF274 GTRD no Cervix (HeLa-S3) 107880092
chr1 234656259 234658871 ZNF274 GTRD no Cervix (HeLa-S3) 21393810
chr1 234656259 234658871 ZNF274 GTRD no Cervix (HeLa-S3) 107880093
chr1 234656314 234660388 ZBTB33 GTRD no Lung (A549) 107880094
chr1 234656314 234660388 ZBTB33 GTRD no Lung (A549) 107880095
chr1 234656376 234658832 ZNF274 GTRD no Cervix (HeLa-S3) 21393812
chr1 234656376 234658832 ZNF274 GTRD no Cervix (HeLa-S3) 107880096
chr1 234656490 234659059 P63 GTRD no Skin (Keratinocyte) 21393813
chr1 234656490 234659059 P63 GTRD no Skin (Keratinocyte) 107880097
chr1 234656518 234661086 ZBTB33 GTRD no Lung (A549) 107880098
chr1 234656518 234661086 ZBTB33 GTRD no Lung (A549) 107880099
chr1 234656535 234658904 P63 GTRD no Skin (Keratinocyte) 21393814
chr1 234656535 234658904 P63 GTRD no Skin (Keratinocyte) 107880100
chr1 234656595 234658827 ZNF274 GTRD no Cervix (HeLa-S3) 21393817
chr1 234656595 234658827 ZNF274 GTRD no Cervix (HeLa-S3) 107880101
chr1 234656621 234660270 ZBTB33 GTRD no Lung (A549) 107880102
chr1 234656621 234660270 ZBTB33 GTRD no Lung (A549) 107880103
chr1 234656629 234659177 ZNF143 GTRD no Epithelial (MCF-7) 21393820
chr1 234656629 234659177 ZNF143 GTRD no Epithelial (MCF-7) 107880104
chr1 234656654 234658836 ZBTB33 GTRD no Lung (A549) 107880105
chr1 234656662 234658733 ZBTB33 GTRD no Brain (SK-N-SH) 21393821
chr1 234656662 234658733 ZBTB33 GTRD no Brain (SK-N-SH) 107880106
chr1 234656713 234658778 ZNF274 GTRD no Bone Marrow (K562) 21393822
chr1 234656713 234658778 ZNF274 GTRD no Bone Marrow (K562) 107880107
chr1 234656730 234657961 ZNF143 GTRD no Epithelial (MCF-7) 21393824
chr1 234656751 234659028 P63 GTRD no Skin (Keratinocyte) 21393829
chr1 234656751 234659028 P63 GTRD no Skin (Keratinocyte) 107880108
chr1 234656751 234660437 TCF7L2 GTRD no Colon (HCT116) 21393830
chr1 234656751 234660437 TCF7L2 GTRD no Colon (HCT116) 107880109
chr1 234656751 234660437 TCF7L2 GTRD no Colon (HCT116) 107880110
chr1 234656793 234658965 P63 GTRD no Skin (Keratinocyte) 21393839
chr1 234656793 234658965 P63 GTRD no Skin (Keratinocyte) 107880111
chr1 234656814 234657889 ZBTB33 GTRD no Brain (SK-N-SH) 21393842
chr1 234656829 234658105 ZNF274 GTRD no Bone Marrow (K562) 21393847
chr1 234656893 234658553 ZBTB33 GTRD no Brain (SK-N-SH) 21393862
chr1 234656893 234658553 ZBTB33 GTRD no Brain (SK-N-SH) 107880112
chr1 234656913 234658724 ZNF274 GTRD no Cervix (HeLa-S3) 21393866
chr1 234656913 234658724 ZNF274 GTRD no Cervix (HeLa-S3) 107880113
chr1 234656929 234658612 ZNF274 GTRD no Cervix (HeLa-S3) 21393869
chr1 234656929 234658612 ZNF274 GTRD no Cervix (HeLa-S3) 107880114
chr1 234656935 234660008 ZBTB33 GTRD no Lung (A549) 107880115
chr1 234656935 234660008 ZBTB33 GTRD no Lung (A549) 107880116
chr1 234656967 234660453 ZBTB33 GTRD no Lung (A549) 107880117
chr1 234656967 234660453 ZBTB33 GTRD no Lung (A549) 107880118
chr1 234656975 234658286 ZNF274 GTRD no Bone Marrow (K562) 21393875
chr1 234656986 234658012 ZNF274 GTRD no Bone Marrow (K562) 21393879
chr1 234657079 234657915 ZNF274 GTRD no Bone Marrow (K562) 21393889
chr1 234657616 234659135 TEF1 GTRD no Bone (Osteoblast) 21393904
chr1 234657616 234659135 TEF1 GTRD no Bone (Osteoblast) 107880119
chr1 234657722 234658665 ZNF143 GTRD no Epithelial (MCF-7) 21393905
chr1 234657722 234658665 ZNF143 GTRD no Epithelial (MCF-7) 107880120
chr1 234657727 234658822 ZNF274 GTRD no Cervix (HeLa-S3) 21393906
chr1 234657727 234658822 ZNF274 GTRD no Cervix (HeLa-S3) 107880121
chr1 234657767 234658617 ZNF274 GTRD no Cervix (HeLa-S3) 21393907
chr1 234657767 234658617 ZNF274 GTRD no Cervix (HeLa-S3) 107880122
chr1 234657838 234658762 ZNF274 GTRD no Liver (HepG2) 21393908
chr1 234657838 234658762 ZNF274 GTRD no Liver (HepG2) 107880123
chr1 234657847 234658645 ZNF274 GTRD no Cervix (HeLa-S3) 21393909
chr1 234657847 234658645 ZNF274 GTRD no Cervix (HeLa-S3) 107880124
chr1 234657866 234657887 IRF1 JASPAR yes 36283027
chr1 234657870 234657891 IRF1 JASPAR yes 36283029
chr1 234657871 234657892 IRF1 JASPAR yes 36283031
chr1 234657872 234657887 PRDM1 JASPAR yes 36283032
chr1 234657872 234657893 IRF1 JASPAR yes 36283033
chr1 234657874 234657889 STAT2 JASPAR yes 36283034
chr1 234657875 234657889 STAT1 JASPAR yes 36283035
chr1 234657876 234657890 IRF7 JASPAR yes 36283036
chr1 234657876 234657897 IRF1 JASPAR yes 36283037
chr1 234657877 234657892 FOXP1 JASPAR yes 36283038
chr1 234657877 234657898 IRF1 JASPAR yes 36283039
chr1 234657878 234657899 IRF1 JASPAR yes 36283040
chr1 234657882 234657903 IRF1 JASPAR yes 36283041
chr1 234657883 234657898 FOXP1 JASPAR yes 36283042
chr1 234657883 234657904 IRF1 JASPAR yes 36283043
chr1 234657883 234658686 ZNF274 GTRD no Cervix (HeLa-S3) 21393910
chr1 234657883 234658686 ZNF274 GTRD no Cervix (HeLa-S3) 107880125
Genes associated with rs139810010[chr1:234657887], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More