EnhancerDB
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  3. rs139873534[chr2:232556028]
Enhancers that have rs139873534[chr2:232556028]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 232518645 232563095 enh6202
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs139873534[chr2:232556028]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 232556014 232556029 IRF9 JASPAR yes 81737250
chr2 232556023 232556035 E2F8 JASPAR yes 81737251
chr2 232556026 232556030 ESR1 TRANSFAC yes 81737252
Genes associated with rs139873534[chr2:232556028], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More