EnhancerDB
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  3. rs139878345[chr1:25106664]
Enhancers that have rs139878345[chr1:25106664]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 25085286 25108435 enh141
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Blood (Karpas-422) Uterus Stomach Skin (Keratinocyte) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs139878345[chr1:25106664]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 25106651 25106667 RFX2 JASPAR yes 27531280
chr1 25106651 25106667 RFX3 JASPAR yes 27531281
chr1 25106651 25106667 RFX4 JASPAR yes 27531282
chr1 25106662 25106665 MYB TRANSFAC yes 27531283
Genes associated with rs139878345[chr1:25106664], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More