EnhancerDB
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  3. rs139890400[chr16:85247311]
Enhancers that have rs139890400[chr16:85247311]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 85219145 85290912 enh16864
Bone Marrow (K562) Astrocyte Colon (HCT116) Adrenal Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs139890400[chr16:85247311]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 85245458 85247432 ZNF274 GTRD no Blood (GM12878) 21721259
chr16 85246384 85248347 TCF7L2 GTRD no Colon (HCT116) 21721335
chr16 85246448 85247703 TCF7L2 GTRD no Colon (HCT116) 21721337
chr16 85246876 85247483 ZNF274 GTRD no Blood (GM12878) 21721339
chr16 85246965 85247978 ZNF274 GTRD no Bone Marrow (K562) 21721340
chr16 85247113 85247449 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21721342
chr16 85247115 85247339 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21721343
chr16 85247163 85247925 TCF7L2 GTRD no Colon (HCT116) 21721344
chr16 85247257 85247517 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21721345
chr16 85247309 85247324 ZIC3 JASPAR yes 12033492
Genes associated with rs139890400[chr16:85247311], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More