EnhancerDB
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  3. rs139893525[chr6:30787025]
Enhancers that have rs139893525[chr6:30787025]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 30740965 30818275 enh23149
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs139893525[chr6:30787025]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 30787022 30787035 NFKB1 JASPAR yes 101054608
chr6 30787022 30787035 NFKB2 JASPAR yes 101054609
chr6 30787025 30787044 CTCF JASPAR yes 101054610
Genes associated with rs139893525[chr6:30787025], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More