EnhancerDB
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  3. rs139894343[chr1:203518007]
Enhancers that have rs139894343[chr1:203518007]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 203511661 203530955 enh12558
Skin (Keratinocyte) Prostate (PC-3) Kidney Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Lung (A549) Stomach Muscle (A673) Placenta Adrenal Uterus Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Neural Stem Cells (H9) Heart
Transcript factors that have rs139894343[chr1:203518007]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 203516480 203518181 ZNF274 GTRD no Cervix (HeLa-S3) 21369434
chr1 203516793 203518222 ZNF274 GTRD no Cervix (HeLa-S3) 21369435
chr1 203517995 203518007 POU2F1 JASPAR yes 34638582
chr1 203517995 203518008 POU3F3 JASPAR yes 34638583
chr1 203517995 203518009 POU1F1 JASPAR yes 34638584
chr1 203517996 203518008 POU3F1 JASPAR yes 34638585
chr1 203517996 203518008 POU3F2 JASPAR yes 34638586
chr1 203517996 203518009 POU2F2 JASPAR yes 34638587
Genes associated with rs139894343[chr1:203518007], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More