EnhancerDB
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  3. rs139920001[chr6:47109372]
Enhancers that have rs139920001[chr6:47109372]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 47092105 47126155 enh23288
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs139920001[chr6:47109372]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 47109360 47109375 FOXP1 JASPAR yes 102002990
chr6 47109361 47109382 IRF1 JASPAR yes 102002991
chr6 47109362 47109377 LEF1 JASPAR yes 102002992
Genes associated with rs139920001[chr6:47109372], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More