EnhancerDB
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  3. rs139940499[chr17:851216]
Enhancers that have rs139940499[chr17:851216]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 845785 881195 enh32038
Astrocyte Colon (HCT116) Pancreas Uterus Stomach Epithelial (MCF-7) Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Thyroid Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673)
Transcript factors that have rs139940499[chr17:851216]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 851067 851657 TCF7L2 GTRD no Colon (HCT116) 21739049
chr17 851067 851657 TCF7L2 GTRD no Colon (HCT116) 108227843
chr17 851216 851226 SP1 JASPAR yes 52643673
chr17 851216 851237 ZNF263 JASPAR yes 52643674
Genes associated with rs139940499[chr17:851216], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More