EnhancerDB
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  3. rs139955322[chr1:156072356]
Enhancers that have rs139955322[chr1:156072356]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 156063928 156076316 enh12294
Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Bone (Osteoblast) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
chr1 156072303 156076849 vista105
VISTA
Transcript factors that have rs139955322[chr1:156072356]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 156072127 156072506 TCF7L2 GTRD no Colon (HCT116) 21341851
chr1 156072127 156072506 TCF7L2 GTRD no Colon (HCT116) 107686536
chr1 156072127 156072506 TCF7L2 GTRD no Colon (HCT116) 107835871
chr1 156072149 156072775 TCF7L2 GTRD no Colon (HCT116) 21341852
chr1 156072149 156072775 TCF7L2 GTRD no Colon (HCT116) 107835872
chr1 156072342 156072357 ZIC3 JASPAR yes 32374326
chr1 156072342 156072357 ZIC3 JASPAR yes 71148370
Genes associated with rs139955322[chr1:156072356], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More