EnhancerDB
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  3. rs139959887[chr17:776094]
Enhancers that have rs139959887[chr17:776094]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 769365 796155 enh4193
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Placenta Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs139959887[chr17:776094]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 776076 776094 RARA JASPAR yes 52635043
chr17 776083 776096 NR2F1 JASPAR yes 52635044
chr17 776087 776095 CREB1 JASPAR yes 52635045
chr17 776091 776101 SREBF2 JASPAR yes 52635046
chr17 776091 776102 USF1 JASPAR yes 52635047
chr17 776091 776102 USF2 JASPAR yes 52635048
chr17 776094 776107 NFKB1 JASPAR yes 52635049
Genes associated with rs139959887[chr17:776094], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More