EnhancerDB
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  3. rs139979913[chr12:125233561]
Enhancers that have rs139979913[chr12:125233561]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 125176905 125261395 enh2676
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Spleen Muscle (Myotube) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs139979913[chr12:125233561]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 125233131 125233636 ZNF274 GTRD no Bone Marrow (K562) 21582724
chr12 125233160 125233786 ZNF274 GTRD no Bone Marrow (K562) 21582725
chr12 125233169 125233792 ZNF274 GTRD no Bone Marrow (K562) 21582726
chr12 125233183 125233902 ZNF274 GTRD no Bone Marrow (K562) 21582727
chr12 125233257 125233790 ZNF274 GTRD no Bone Marrow (K562) 21582728
chr12 125233270 125233727 ZNF274 GTRD no Bone Marrow (K562) 21582729
chr12 125233273 125233650 ZNF274 GTRD no Bone Marrow (K562) 21582730
chr12 125233280 125233707 ZNF274 GTRD no Bone Marrow (K562) 21582731
chr12 125233286 125233633 ZNF274 GTRD no Bone Marrow (K562) 21582732
chr12 125233313 125233583 ZNF274 GTRD no Bone Marrow (K562) 21582733
chr12 125233324 125233607 ZNF274 GTRD no Bone Marrow (K562) 21582734
chr12 125233334 125233804 ZNF274 GTRD no Bone Marrow (K562) 21582735
chr12 125233369 125233650 ZNF274 GTRD no Bone Marrow (K562) 21582736
chr12 125233554 125233569 FOXP1 JASPAR yes 124417288
chr12 125233555 125233575 RREB1 JASPAR yes 124417289
Genes associated with rs139979913[chr12:125233561], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More