EnhancerDB
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  3. rs139993483[chr12:125198876]
Enhancers that have rs139993483[chr12:125198876]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 125176905 125261395 enh2676
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Spleen Muscle (Myotube) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs139993483[chr12:125198876]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 125198057 125199373 TCF7L2 GTRD no Colon (HCT116) 21582177
chr12 125198057 125199373 TCF7L2 GTRD no Colon (HCT116) 108069555
chr12 125198057 125199373 TCF7L2 GTRD no Colon (HCT116) 108069556
chr12 125198389 125199204 ZNF274 GTRD no Cervix (HeLa-S3) 21582205
chr12 125198389 125199204 ZNF274 GTRD no Cervix (HeLa-S3) 108069591
chr12 125198520 125199101 ZNF274 GTRD no Bone Marrow (K562) 21582210
chr12 125198520 125199101 ZNF274 GTRD no Bone Marrow (K562) 108069596
chr12 125198552 125199004 ZNF143 GTRD no Epithelial (MCF-7) 21582211
chr12 125198552 125199004 ZNF143 GTRD no Epithelial (MCF-7) 108069597
chr12 125198628 125199130 ZNF143 GTRD no Epithelial (MCF-7) 21582212
chr12 125198686 125198964 ZNF143 GTRD no Epithelial (MCF-7) 21582213
chr12 125198691 125199000 ZNF274 GTRD no Cervix (HeLa-S3) 21582214
chr12 125198694 125198972 ZNF274 GTRD no Bone Marrow (K562) 21582215
chr12 125198706 125198928 ZNF274 GTRD no Liver (HepG2) 21582216
chr12 125198706 125199213 ZBTB33 GTRD no Lung (A549) 21582217
chr12 125198727 125198938 ZNF143 GTRD no Epithelial (MCF-7) 21582218
Genes associated with rs139993483[chr12:125198876], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More