EnhancerDB
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  3. rs139993708[chr1:10563264]
Enhancers that have rs139993708[chr1:10563264]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 10562245 10593475 enh59
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs139993708[chr1:10563264]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 10563259 10563271 TFAP2A JASPAR yes 26718030
chr1 10563259 10563271 TFAP2B JASPAR yes 26718031
chr1 10563259 10563271 TFAP2C JASPAR yes 26718032
chr1 10563260 10563271 TFAP2B JASPAR yes 26718033
Genes associated with rs139993708[chr1:10563264], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More