EnhancerDB
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  3. rs140001506[chr12:125247492]
Enhancers that have rs140001506[chr12:125247492]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 125176905 125261395 enh2676
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Spleen Muscle (Myotube) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs140001506[chr12:125247492]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 125247187 125247913 ZNF274 GTRD no Bone Marrow (K562) 21582891
chr12 125247415 125248016 ZNF274 GTRD no Bone Marrow (K562) 21582892
chr12 125247416 125247986 ZNF274 GTRD no Blood (GM12878) 21582893
chr12 125247434 125248033 ZBTB33 GTRD no Lung (A549) 21582894
chr12 125247462 125247832 ZNF274 GTRD no Bone Marrow (K562) 21582895
chr12 125247484 125247499 FOXP1 JASPAR yes 124419133
chr12 125247489 125247499 HOXA13 JASPAR yes 124419134
chr12 125247489 125247499 HOXB13 JASPAR yes 124419135
chr12 125247489 125247499 HOXD13 JASPAR yes 124419136
chr12 125247489 125247500 HOXA10 JASPAR yes 124419137
chr12 125247490 125247499 CDX1 JASPAR yes 124419138
chr12 125247490 125247501 CDX2 JASPAR yes 124419139
Genes associated with rs140001506[chr12:125247492], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More