EnhancerDB
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  3. rs140049579[chr17:25675967]
Enhancers that have rs140049579[chr17:25675967]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 25656275 25685575 enh4305
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs140049579[chr17:25675967]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 25675724 25676380 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21747651
chr17 25675724 25676380 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108245221
chr17 25675928 25676308 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21747652
chr17 25675928 25676308 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108245222
chr17 25675962 25675968 ZNF354C JASPAR yes 53622894
chr17 25675964 25676428 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21747653
chr17 25675964 25676428 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108245223
chr17 25675967 25675981 PLAG1 JASPAR yes 53622895
Genes associated with rs140049579[chr17:25675967], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More