EnhancerDB
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  3. rs140056381[chr17:55552065]
Enhancers that have rs140056381[chr17:55552065]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 55530146 55569915 enh4488
Bone Marrow (K562) Astrocyte Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs140056381[chr17:55552065]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 55552051 55552071 RREB1 JASPAR yes 54958952
chr17 55552054 55552074 RREB1 JASPAR yes 54958953
chr17 55552056 55552068 FOXC2 JASPAR yes 54958955
chr17 55552058 55552073 FOXP1 JASPAR yes 54958956
chr17 55552059 55552079 RREB1 JASPAR yes 54958957
chr17 55552059 55552080 IRF1 JASPAR yes 54958958
chr17 55552060 55552081 IRF1 JASPAR yes 54958959
chr17 55552064 55552078 IRF7 JASPAR yes 54958960
chr17 55552065 55552085 RREB1 JASPAR yes 54958961
chr17 55552065 55552086 IRF1 JASPAR yes 54958962
Genes associated with rs140056381[chr17:55552065], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More