EnhancerDB
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  3. rs140147408[chr17:56030646]
Enhancers that have rs140147408[chr17:56030646]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 55982093 56031480 enh4496
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs140147408[chr17:56030646]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 56030635 56030650 RFX5 JASPAR yes 55004339
chr17 56030640 56030649 TFAP2A JASPAR yes 55004340
chr17 56030645 56030656 NFKB1 JASPAR yes 55004341
Genes associated with rs140147408[chr17:56030646], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More