EnhancerDB
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  3. rs140160667[chr5:173193323]
Enhancers that have rs140160667[chr5:173193323]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 173178093 173268555 enh8886
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Spleen Muscle (Myotube) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs140160667[chr5:173193323]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 173193239 173193880 TCF7L2 UCSC Txn Factor no Conserved 108537593
chr5 173193305 173193775 GATA3 UCSC Txn Factor no Conserved 108537594
chr5 173193317 173193327 CLOCK JASPAR yes 67902263
chr5 173193317 173193327 HEY1 JASPAR yes 67902264
chr5 173193319 173193324 MYC TRANSFAC yes 67902265
chr5 173193319 173193324 USF1 TRANSFAC yes 67902266
chr5 173193319 173193324 USF2 TRANSFAC yes 67902267
Genes associated with rs140160667[chr5:173193323], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More