EnhancerDB
  1. Home
  2. SNP
  3. rs140198717[chr3:58061059]
Enhancers that have rs140198717[chr3:58061059]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 58016005 58062055 enh20647
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs140198717[chr3:58061059]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 58061052 58061071 CTCF JASPAR yes 2673480
chr3 58061057 58061069 TAL1 JASPAR yes 2673481
chr3 58061059 58061069 FIGLA JASPAR yes 2673482
chr3 58061059 58061069 MSC JASPAR yes 2673483
chr3 58061059 58061069 TFAP4 JASPAR yes 2673484
Genes associated with rs140198717[chr3:58061059], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More
chr3 57231944 57260549 - HESX1 ENSG00000163666.4 57260549 800510 Pancreas 0.354389 3788
chr3 57741177 57914895 + SLMAP ENSG00000163681.10 57741177 146164 Lung 0.144279 3795