EnhancerDB
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  3. rs140257525[chr1:172328524]
Enhancers that have rs140257525[chr1:172328524]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 172318125 172332422 enh12370
Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Ovary Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Spleen Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs140257525[chr1:172328524]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 172327940 172328653 GATA3 UCSC Txn Factor no Conserved 107845638
chr1 172327978 172328553 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107845647
chr1 172327978 172328594 EP300 UCSC Txn Factor no Conserved 107845648
chr1 172327991 172328561 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21349882
chr1 172327991 172328561 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 107845653
chr1 172327999 172328557 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107845654
chr1 172328047 172328543 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21349885
chr1 172328047 172328543 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 107845660
chr1 172328061 172328565 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21349886
chr1 172328061 172328565 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107845661
chr1 172328061 172328601 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107845662
chr1 172328068 172328552 GATA2 UCSC Txn Factor no Conserved 107845664
chr1 172328088 172328604 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21349887
chr1 172328088 172328604 TFAP2C UCSC Txn Factor no Conserved 107845665
chr1 172328088 172328604 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107845666
chr1 172328090 172328574 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107845667
chr1 172328091 172328621 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21349888
chr1 172328091 172328621 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107845668
chr1 172328116 172328586 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 21349889
chr1 172328116 172328586 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 107845669
chr1 172328130 172328606 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21349891
chr1 172328130 172328606 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107845672
chr1 172328136 172328592 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21349893
chr1 172328136 172328592 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107845674
chr1 172328513 172328524 FOXA1 JASPAR yes 33125881
Genes associated with rs140257525[chr1:172328524], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More