EnhancerDB
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  3. rs140275260[chr1:234879550]
Enhancers that have rs140275260[chr1:234879550]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 234877045 234913055 enh12796
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs140275260[chr1:234879550]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 234873111 234880291 ZNF274 GTRD no Bone Marrow (K562) 21397133
chr1 234873111 234880291 ZNF274 GTRD no Bone Marrow (K562) 21397134
chr1 234878419 234883607 ZNF274 GTRD no Blood (GM12878) 107881636
chr1 234878974 234883568 ZNF274 GTRD no Blood (GM12878) 107881637
chr1 234878977 234880078 ZNF274 GTRD no Liver (HepG2) 21397472
chr1 234878982 234883403 ZNF274 GTRD no Blood (GM12878) 107881638
chr1 234879020 234879570 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21397473
chr1 234879031 234880068 ZNF274 GTRD no Bone Marrow (K562) 21397474
chr1 234879051 234880925 ZNF274 GTRD no Bone Marrow (K562) 21397475
chr1 234879122 234879740 ZNF274 GTRD no Liver (HepG2) 21397476
chr1 234879175 234879984 ZNF274 GTRD no Bone Marrow (K562) 21397477
chr1 234879235 234879569 ZNF274 GTRD no Liver (HepG2) 21397478
chr1 234879312 234880153 ZNF274 GTRD no Bone Marrow (K562) 21397479
chr1 234879532 234879553 IRF1 JASPAR yes 36310102
chr1 234879536 234879550 STAT1 JASPAR yes 36310104
chr1 234879536 234879551 PRDM1 JASPAR yes 36310105
chr1 234879536 234879551 STAT2 JASPAR yes 36310106
chr1 234879536 234879554 IRF2 JASPAR yes 36310107
chr1 234879537 234879551 TCF7L2 JASPAR yes 36310108
chr1 234879537 234879552 LEF1 JASPAR yes 36310109
chr1 234879544 234879867 ZNF274 GTRD no Bone Marrow (K562) 21397480
chr1 234879545 234879557 BHLHE23 JASPAR yes 36310111
chr1 234879546 234879556 BHLHE22 JASPAR yes 36310112
chr1 234879546 234879556 OLIG1 JASPAR yes 36310113
chr1 234879546 234879556 OLIG2 JASPAR yes 36310114
chr1 234879546 234879556 OLIG3 JASPAR yes 36310115
Genes associated with rs140275260[chr1:234879550], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More