EnhancerDB
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  3. rs140308762[chr1:171402343]
Enhancers that have rs140308762[chr1:171402343]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 171385965 171412775 enh12367
Brain (SK-N-MC) Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Lung (A549) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Placenta Lung (PC-9) Muscle (Myoblast) Breast Spleen Muscle (Myotube) Prostate (RWPE1)
Transcript factors that have rs140308762[chr1:171402343]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 171402332 171402344 PKNOX1 JASPAR yes 33080243
chr1 171402332 171402344 PKNOX2 JASPAR yes 33080244
chr1 171402332 171402344 TGIF1 JASPAR yes 33080245
chr1 171402333 171402343 FIGLA JASPAR yes 33080246
chr1 171402333 171402343 ID4 JASPAR yes 33080247
chr1 171402333 171402343 TCF3 JASPAR yes 33080248
chr1 171402333 171402343 TCF4 JASPAR yes 33080249
chr1 171402334 171402343 SNAI2 JASPAR yes 33080250
Genes associated with rs140308762[chr1:171402343], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More