EnhancerDB
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  3. rs140417836[chr6:88444290]
Enhancers that have rs140417836[chr6:88444290]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 88422133 88444375 enh23401
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Heart
Transcript factors that have rs140417836[chr6:88444290]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 88444285 88444298 TFAP2A JASPAR yes 103326803
chr6 88444285 88444298 TFAP2B JASPAR yes 103326804
chr6 88444285 88444298 TFAP2C JASPAR yes 103326805
chr6 88444286 88444297 EBF1 JASPAR yes 103326806
Genes associated with rs140417836[chr6:88444290], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More