EnhancerDB
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  3. rs140422209[chr1:9223599]
Enhancers that have rs140422209[chr1:9223599]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 9220009 9228971 enh11480
Colon (HCT116) Pancreas Uterus Stomach Epithelial (MCF-7) Skin (Keratinocyte) Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1)
Transcript factors that have rs140422209[chr1:9223599]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 9223516 9224146 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107802006
chr1 9223516 9224146 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 107802007
chr1 9223597 9223612 FOXP1 JASPAR yes 26624131
chr1 9223598 9223613 FOXP1 JASPAR yes 26624132
chr1 9223599 9223605 TBP TRANSFAC yes 26624133
chr1 9223599 9223614 FOXP1 JASPAR yes 26624134
chr1 9223599 9223620 IRF1 JASPAR yes 26624135
Genes associated with rs140422209[chr1:9223599], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More