EnhancerDB
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  3. rs140422708[chr1:16121106]
Enhancers that have rs140422708[chr1:16121106]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 16111145 16132915 enh11541
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs140422708[chr1:16121106]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 16121099 16121111 PKNOX2 JASPAR yes 27002081
chr1 16121100 16121109 SNAI2 JASPAR yes 27002082
chr1 16121100 16121110 ID4 JASPAR yes 27002083
chr1 16121100 16121110 TCF3 JASPAR yes 27002084
chr1 16121100 16121110 TCF4 JASPAR yes 27002085
chr1 16121104 16121113 NFIX JASPAR yes 27002086
chr1 16121106 16121112 NFIC JASPAR yes 27002087
Genes associated with rs140422708[chr1:16121106], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More