EnhancerDB
  1. Home
  2. SNP
  3. rs140427139[chr11:12454724]
Enhancers that have rs140427139[chr11:12454724]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr11 12449945 12474246 enh13781
Brain (SK-N-MC) Astrocyte Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Thyroid Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Liver (HepG2) Lung Muscle (A673) Heart
Transcript factors that have rs140427139[chr11:12454724]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr11 12454613 12455340 ZBTB33 GTRD no Brain (SK-N-SH) 21471723
chr11 12454613 12455340 ZBTB33 GTRD no Brain (SK-N-SH) 107959260
chr11 12454616 12455483 ZBTB33 GTRD no Brain (SK-N-SH) 21471724
chr11 12454616 12455483 ZBTB33 GTRD no Brain (SK-N-SH) 107959261
chr11 12454650 12455424 ZBTB33 GTRD no Brain (SK-N-SH) 21471725
chr11 12454650 12455424 ZBTB33 GTRD no Brain (SK-N-SH) 107959262
chr11 12454703 12454724 IRF1 JASPAR yes 37445850
Genes associated with rs140427139[chr11:12454724], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More