EnhancerDB
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  3. rs140446893[chr5:159593160]
Enhancers that have rs140446893[chr5:159593160]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 159580425 159605208 enh22765
Astrocyte Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs140446893[chr5:159593160]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 159591962 159593679 POLR2A UCSC Txn Factor no Conserved 108537258
chr5 159591962 159593679 POLR2A UCSC Txn Factor no Conserved 108537259
chr5 159592754 159593198 GATA2 UCSC Txn Factor no Conserved 108537265
chr5 159593152 159593161 PITX3 JASPAR yes 67345312
chr5 159593152 159593162 GSC2 JASPAR yes 67345313
chr5 159593152 159593162 GSC JASPAR yes 67345314
chr5 159593153 159593161 OTX1 JASPAR yes 67345315
Genes associated with rs140446893[chr5:159593160], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More