EnhancerDB
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  3. rs140478869[chr1:7359478]
Enhancers that have rs140478869[chr1:7359478]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 7347865 7366195 enh26511
Brain (SK-N-MC) Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Uterus Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Muscle (Myoblast) Breast Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
chr1 7359415 7359679 vista193
VISTA
Transcript factors that have rs140478869[chr1:7359478]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 7359263 7359824 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 107801924
chr1 7359468 7359483 ZIC3 JASPAR yes 26452374
chr1 7359468 7359483 ZIC4 JASPAR yes 26452375
chr1 7359468 7359483 ZIC3 JASPAR yes 118222277
chr1 7359468 7359483 ZIC4 JASPAR yes 118222278
chr1 7359468 7359484 GLIS1 JASPAR yes 26452376
chr1 7359468 7359484 GLIS1 JASPAR yes 118222279
chr1 7359469 7359483 GLIS2 JASPAR yes 26452377
chr1 7359469 7359483 GLIS3 JASPAR yes 26452378
chr1 7359469 7359483 GLIS2 JASPAR yes 118222280
chr1 7359469 7359483 GLIS3 JASPAR yes 118222281
Genes associated with rs140478869[chr1:7359478], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More