EnhancerDB
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  3. rs140487614[chr5:77789626]
Enhancers that have rs140487614[chr5:77789626]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 77784972 77817655 enh8511
Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs140487614[chr5:77789626]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 77789617 77789628 CDX2 JASPAR yes 63592168
chr5 77789618 77789628 MNX1 JASPAR yes 63592169
chr5 77789618 77789629 HOXA10 JASPAR yes 63592170
chr5 77789619 77789628 CDX1 JASPAR yes 63592171
chr5 77789619 77789629 HOXA13 JASPAR yes 63592172
chr5 77789619 77789629 HOXB13 JASPAR yes 63592173
chr5 77789619 77789629 HOXD13 JASPAR yes 63592174
chr5 77789623 77789632 SRY JASPAR yes 63592175
chr5 77789623 77789634 PHOX2A JASPAR yes 63592176
chr5 77789623 77789634 PROP1 JASPAR yes 63592177
chr5 77789626 77789635 VENTX JASPAR yes 63592178
chr5 77789626 77789636 GSX2 JASPAR yes 63592179
chr5 77789626 77789636 MNX1 JASPAR yes 63592180
chr5 77789626 77789637 HOXA10 JASPAR yes 63592181
Genes associated with rs140487614[chr5:77789626], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More