EnhancerDB
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  3. rs140514721[chr12:109060490]
Enhancers that have rs140514721[chr12:109060490]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 109055765 109067015 enh2584
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs140514721[chr12:109060490]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 109060485 109060493 HOXA5 JASPAR yes 123610662
chr12 109060486 109060496 EN2 JASPAR yes 123610663
chr12 109060486 109060496 ESX1 JASPAR yes 123610664
chr12 109060486 109060496 GBX1 JASPAR yes 123610665
chr12 109060486 109060496 GBX2 JASPAR yes 123610666
chr12 109060486 109060496 GSX1 JASPAR yes 123610667
chr12 109060486 109060496 HESX1 JASPAR yes 123610668
chr12 109060486 109060496 HOXB3 JASPAR yes 123610669
chr12 109060486 109060496 LBX2 JASPAR yes 123610670
chr12 109060486 109060496 LHX2 JASPAR yes 123610671
chr12 109060486 109060496 RAX JASPAR yes 123610672
chr12 109060487 109060495 BARX1 JASPAR yes 123610673
chr12 109060487 109060495 BSX JASPAR yes 123610674
chr12 109060487 109060495 EN1 JASPAR yes 123610675
chr12 109060487 109060495 ISX JASPAR yes 123610676
chr12 109060487 109060495 LHX9 JASPAR yes 123610677
chr12 109060487 109060495 MSX1 JASPAR yes 123610678
chr12 109060487 109060495 MSX2 JASPAR yes 123610679
chr12 109060487 109060495 PRRX1 JASPAR yes 123610680
chr12 109060487 109060495 RAX2 JASPAR yes 123610681
chr12 109060487 109060495 SHOX JASPAR yes 123610682
chr12 109060487 109060496 VENTX JASPAR yes 123610683
chr12 109060487 109060502 NFYB JASPAR yes 123610684
Genes associated with rs140514721[chr12:109060490], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More