EnhancerDB
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Enhancers that have rs140515238[chr17:78625661]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 78617185 78655235 enh4633
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Neural Stem Cells (H9) Thymus Prostate (PC-3) Large Intestine Esophagus Placenta Muscle (Myoblast) Breast Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs140515238[chr17:78625661]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 78624989 78626449 TCF7L2 GTRD no Colon (HCT116) 21797079
chr17 78624989 78626449 TCF7L2 GTRD no Colon (HCT116) 108307139
chr17 78625610 78626150 TCF7L2 GTRD no Colon (HCT116) 21797080
chr17 78625610 78626150 TCF7L2 GTRD no Colon (HCT116) 108307140
Genes associated with rs140515238[chr17:78625661], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More